DESCRIPTIONS

about preinst.r (v6.7, Dec. 26, 2022)

VERY IMPORTANT. PLEASE READ CAREFULLY TO SAVE YOUR TIME AND AVOID POSSIBLE ERRORS.

1. Only R v4.0.x ~ v4.1.x are supported for the moment.
2. Please run these packages only with R console/terminal; RStudio may not be compatible.

This file is not a part of R packages, but an R script to automate the installation for all the required packages/libraries for the listed R packages, as well as the packages listed here. Please download preinst.r from this page and place/copy it to the R working directory. Use 'getwd()' to find out where the directory is. Under R console, type source("preinst.r") and click the package to install. You require system administrator's privilege (Windows & Linux) to run this script. Answer "Yes" if asked for anything during installation. For Windows OS, it will ask if want to install GTK+? in a popup dialogue window. Click OK or just press [Enter] key once directly to install it. GTK+ runtime is now bundled with RGtk2 installation for Windows platform, as well as more GTK+ (a.k.a. GTK2) themes were added.

Package: bear

• Version: 2.9.1
• Date: 2022-04-03
• Title: Data Analysis Tool for Average Bioequivalence and Bioavailability
• Author: Hsin-ya Lee, Yung-jin Lee
• Maintainer: Yung-jin Lee
• Depends: R (>= 4.0.0)
• Description:

This data analysis tool for average bioequivalence and bioavailability study includes sample size estimation, non-compartmental analysis, ANOVA for a standard 2x2x2 crossover design or a parallel study, and using a linear mixed effect model for a replicate crossover design with a 2-treatment, 2-sequence, 3to 6-period design.

• License: GPL (>= 2)
• NeedsCompilation: no
• URL: https://pkpd168.com/bear
• Contact: Yung-jin Lee (pkpd168 at gmail.com)

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Package: ivivc

• Version: 0.3.4
• Date: 2022-04-03
• Title: A Data Analysis Tool for In Vitro-In Vivo Correlation
• Author: Hsin-ya Lee, Yung-jin Lee
• Maintainer: Yung-jin Lee
• Depends: R (>= 4.0.0), stats4, reshape
• Imports: data.table, optimx, sciplot, png, grid, deSolve, minpack.lm
• Description:

A menu-driven package for in vitro-in vivo Correlation (IVIVC) model building, data analysis and model validation (only internal validation) based on Wagner-Nelson Method (only for the one-compartment PK model) for Level A correlation.

• License: GPL (>= 2)
• URL: https://pkpd168.com/ivivc
• Contact: Yung-jin Lee (pkpd168 at gmail.com)

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Package: PKfit

• Version: 1.5.0
• Date: 2022-04-28
• Title: Data Analysis Tool for Pharmacokinetics
• Author: Chun-ying Lee, Yung-jin Lee
• Maintainer: Yung-jin Lee
• Depends: R (>= 4.0.0)
• Description:

A nonlinear regression program which is designed to perform model/curve fitting and model simulations for pharmacokinetics.

• License: GPL (>= 2)
• URL: https://pkpd168.com/pkfit
• Contact: Yung-jin Lee (pkpd168 at gmail.com)

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Package: stab

• Version: 0.5.9
• Date: 2024-03-23
• Title: Data Analysis for Drug Stability
• Author: Hsin-ya Lee, Yung-jin Lee
• Maintainer: Yung-jin Lee
• Depends: R (>= 4.0.0), stats4, MASS, reshape
• Description:

Data analysis of drug stability for shelf-life estimation based on ICH Q1E guideline with single-factor analysis for single-batch or multiple-batch.

• License: GPL (>= 2)
• URL: https://pkpd168.com/stab
• Contact: Yung-jin Lee (pkpd168 at gmail.com)

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Package: tdm

• Title: Data Analysis for Therapeutic Drug Monitoring
• Version: 3.1.5
• Date: 2022-04-03
• Author: Miou-ting Chen, Yung-jin Lee
• Description:

Using Bayesian inference to estimate individual pharmacokinetic parameters with one or more drug serum/plasma concentrations obtained from a single subject using a Bayesian inference program, JAGS (Just Another Gibbs Sampling; a computer program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo simulation), interfaced with rjags and ggmcmc. Besides, it also can calculate a suggested dose based on the target drug concentration (C ->D) or calculate a predicted drug concentration with a given dose (D -> C).

• Maintainer: Yung-jin Lee
• Depends: R (>= 4.0.0)
• Imports: rjags, coda, png, grid, deSolve
• License: GPL (>=2)
• URL: https://pkpd168.com/tdm
• Contact: Yung-jin Lee (pkpd168 at gmail.com)