ViReMa (Viral Recombination Mapper) detects and reports recombination or fusion events in virus genomes using deep sequencing datasets.

Feb 2014 - Our paper (Open Access) is available at Nucleic Acids Research:
"Discovery of functional genomic motifs in viruses with ViReMa–a Virus Recombination Mapper–for analysis of next-generation sequencing data"
http://nar.oxfordjournals.org/content/42/2/e11

This is an on-going project and updates will be regularly posted. Please get in touch with any questions, problems or suggestions.

Project Samples

Flock House Virus Recombination Map with ViReMa, view with IGV GUI available from 0.15

Project Activity

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Categories

Bio-Informatics

License

MIT License

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Additional Project Details

Intended Audience

Science/Research

Programming Language

Python

Related Categories

Python Bio-Informatics Software

Registered

2013-06-18
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