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VDAP-GUI is available for free download at http://sourceforge.net/projects/vdapgui/files/.

REQUIREMENTS

1. Perl (with Tk module) 
2. Java (Runtime or SDK)



INSTALLATION INSTRUCTIONS

1. Open a new terminal and navigate to VDAP-GUI directory.
2. To install required packages in DEBIAN based Operating Systems run VDAP_setup_DEBIAN.sh and in RPM based Operating Systems run VDAP_setup_RPM.sh with root 
   privilege. For example sudo sh VDAP_setup_DEBIAN.sh
3. To run pipeline double click VDAP_run.sh or execute from terminal by typing sh VDAP_run.sh
4. From the menu, user can select appropriate modules for variant discovery/annotation 
   or viewing results of an existing project.
5. Read Manual.pdf to get all the details of each module.



CITATION
If you make use of VDAP-GUI in your research, we would appreciate a citation of the following paper:
Menon, R., N. V. Patel, et al. (2016). "VDAP-GUI: a user-friendly pipeline for variant discovery and annotation of raw next-generation sequencing data." 3 Biotech 6(1): 1-7.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4754298/
 
 
*********HAPPY VDAPING*********



Regards,
VDAP Team
Source: README, updated 2016-02-25