Raw sequences produced by next generation sequencing (NGS) machines may contain adapter, linker, barcode and fingerprint sequences. TagDust2 is a program to extract and correctly label the sequences to be mapped in downstream pipelines.

TagDust allows users to specify the expected architecture of a read and converts it into a hidden Markov model. The latter can assign sequences to a particular barcode (or index) even in the presence of sequencing errors. Sequences not matching the architecture (primer dimers, contaminants etc.) are automatically discarded

Project Samples

TagDust Screenshot 1

Project Activity

See All Activity >

License

GNU General Public License version 3.0 (GPLv3)

Follow TagDust

TagDust Web Site

Other Useful Business Software
AI-generated apps that pass security review Icon
AI-generated apps that pass security review

Stop waiting on engineering. Build production-ready internal tools with AI—on your company data, in your cloud.

Retool lets you generate dashboards, admin panels, and workflows directly on your data. Type something like “Build me a revenue dashboard on my Stripe data” and get a working app with security, permissions, and compliance built in from day one. Whether on our cloud or self-hosted, create the internal software your team needs without compromising enterprise standards or control.
Try Retool free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of TagDust!

Additional Project Details

Registered

2013-10-11
Report inappropriate content