Update - SRST2 Now Available
------
25 Sep, 2013
This project has now been replaced by SRST2 - Short Read Sequence Typing for Bacterial Pathogens, available at http://katholt.github.io/srst2/
The new SRST2 program does gene typing as well as MLST (e.g. typing resistance genes, virulence genes, etc). SRST2 is faster and more accurate than the old SRST, using bowtie2 to achieve local alignments (no need for flanking sequences) and a brand new scoring system.
Categories
Bio-InformaticsFollow srst
Other Useful Business Software
Crowdtesting That Delivers | Testeum
Testeum connects your software, app, or website to a worldwide network of testers, delivering detailed feedback in under 48 hours. Ensure functionality and refine UX on real devices, all at a fraction of traditional costs. Trusted by startups and enterprises alike, our platform streamlines quality assurance with actionable insights.
Rate This Project
Login To Rate This Project
User Reviews
Be the first to post a review of srst!