SNeP - Historical Ne Trends

Brought to you by: mariobarbato

Downloads: 26 This Week

Last Update: 2023-07-05

Browse Code

Get an email when there's a new version of SNeP - Historical Ne Trends

A tool to estimate trends in recent effective population size trajectories using genome-wide SNP data.

Features

Effective population size estimation from SNPChip data.
Uses PLINK format (.ped, .map) as input.
Multithreaded
Available for Win and Linux environments (OSX in the near future).

Project Activity

See All Activity >

Follow SNeP - Historical Ne Trends

SNeP - Historical Ne Trends Web Site

Other Useful Business Software

MongoDB Atlas runs apps anywhere Icon

MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.

Start Free

Rate This Project

Login To Rate This Project

User Reviews

Be the first to post a review of SNeP - Historical Ne Trends!

Additional Project Details

Registered

2014-10-22

Report inappropriate content

Recommended Projects

fcGENE: Genotype format converter
Main application is twofold: first to convert genotype SNP data into formats of different imputation tools like PLINK MACH, IMPUTE, BEAGLE and BIMBBAM, second to transform imputed data into different file formats like PLINK, HAPLOVIEW, EIGENSOFT and SNPTEST. Readable file formats:...
SNEP
SNEP is an graphical user interface to manage Asterisk PBX. It provides high level control over routing and users administration making the PBX administration easier to non-technical users. Access our Chat community at Slack: http://snep.slack.com
SPANDx
SPANDx is your one-stop tool for identifying SNP and indel variants in haploid genomes using NGS data. SPANDx performs alignment of raw NGS reads against your chosen reference genome or pan-genome, followed by accurate variant calling and annotation, and locus presence/absence determination....
ParseCNV
ParseCNV CNV call association software takes CNV calls as input and creates SNP based statistics for CNV occurrence in population study cases and controls then calls CNVRs based on neighboring SNPs of similar significance.
Smart-AI-Crypto-Trading-Bot
AI Crypto trading bot The Smart AI Crypto Trading Bot is an advanced software solution designed to automate cryptocurrency trading by leveraging artificial intelligence and machine learning technologies. This sophisticated trading bot performs comprehensive market analysis, including historical...