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SAM tools

4.6 Stars (31)
2,002 Downloads (This Week)
Last Update:
Download samtools-1.5.tar.bz2
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BSD Linux

Description

SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAMtools provide efficient utilities on manipulating alignments in the SAM format.

The main samtools source code repository moved to GitHub in March 2012. For ongoing development since then, see http://github.com/samtools/samtools

SAM tools Web Site

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User Ratings

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ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
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support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 3 / 5
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User Reviews

  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    A core component of many a bioinformatics pipeline

    Posted 01/30/2014
  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Error: $./samtools: /lib64/libz.so.1: version `ZLIB_1.2.3.3' not found (required by ./samtools) How can I fix this problem? THX

    Posted 12/18/2013
  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Nice, thank you

    Posted 06/26/2013
  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Wonderful project! Thanks for amazing work!

    Posted 04/07/2013
  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Awesome tool

    Posted 11/23/2012
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Additional Project Details

Intended Audience

Science/Research, Developers

User Interface

Command-line, Curses/Ncurses

Programming Language

Perl, C

Registered

2008-11-25

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