SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAMtools provide efficient utilities on manipulating alignments in the SAM format.

The main samtools source code repository moved to GitHub in March 2012. For ongoing development since then, see http://github.com/samtools/samtools

Project Activity

See All Activity >

Categories

Bio-Informatics

Follow SAM tools

SAM tools Web Site

Other Useful Business Software

Locate Sensitive Data across Networks and Workstations Locate Sensitive Data across Networks and Workstations Icon
Locate Sensitive Data across Networks and Workstations Icon

Build the Business Case for Effective Security Investments

Your customers recognize the importance of security, but often don’t realize the urgency until they see something tangible. SolarWinds Risk Intelligence assigns value to your data vulnerability, helping you build a strong business case for data protection and triage the most important problems to tackle. Some powerful features include data risk communicated as financial impact, at-risk data discovery and PCI DSS, PAN & PII scans.

Rate This Project

Login To Rate This Project

User Ratings

★★★★★
★★★★
★★★
★★
24
0
0
1
2
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 3 / 5

User Reviews

  • A core component of many a bioinformatics pipeline

  • Error: $./samtools: /lib64/libz.so.1: version `ZLIB_1.2.3.3' not found (required by ./samtools) How can I fix this problem? THX

  • Brilliant idea, code is not robust. Doesn't check return status of malloc, other libraries. One shouldn't have to use gdb to understand an expected error.

    1 user found this review helpful.
  • Nice, thank you

    1 user found this review helpful.
  • Wonderful project! Thanks for amazing work!

    2 users found this review helpful.
Read more reviews >

Additional Project Details

Intended Audience

Science/Research, Developers

User Interface

Command-line, Curses/Ncurses

Programming Language

Perl, C

Registered

2008-11-25