Applying the LIBSVM, a package of support vector machine, SAMSVM was developed to correctly detect and filter the misaligned reads of SAM format. Such filtration can reduce false positives in alignment and the following variant analysis.

Features

  • C++
  • bwa and samtools are required

Project Activity

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Categories

Bio-Informatics

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User Reviews

  • All steps mentioned in details and Easy to handle, Nice work
  • Very good program! Easy and useful!
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Additional Project Details

Operating Systems

Linux, BSD

Languages

English

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

C++

Database Environment

Flat-file

Related Categories

C++ Bio-Informatics Software

Registered

2014-12-12