RIPE (Regulatory network Inference from joint Perturbation and Expression data) is a novel three-step method that integrates both perturbation data and steady state gene expression data in order to estimate a regulatory network. The ripe package is written in R, with additional functionality provided by a MATLAB executable file. The executable file uses a runtime engine called the MATLAB Compiler Runtime (MCR). The executable for different architectures is distributed on this site together with the R package itself.

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GNU General Public License version 2.0 (GPLv2)

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Operating Systems

Mac, Windows

Programming Language

MATLAB, S/R

Related Categories

MATLAB Statistics Software, S/R Statistics Software

Registered

2013-04-21