ReferenceFree

These are Python scripts plus C/C++ programs for automating the reference free genomic analysis described in:

Kua C-S, Ruan J, Harting J, Ye C-X, Helmus MR, et al. (2012) Reference-Free Comparative Genomics of 174 Chloroplasts. PLoS One 7(11).

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0048995

Analytical concept conceived by CHCannon and CSKua. Original script written in Mathematica by CHCannon.

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Additional Project Details

Operating Systems

Linux, Mac

Intended Audience

Science/Research

User Interface

Console/Terminal

Programming Language

C, C++, Perl, Python

Related Categories

Python Bio-Informatics Software, Perl Bio-Informatics Software, C++ Bio-Informatics Software, C Bio-Informatics Software

Registered

2012-04-02

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