In addition to RPKM (Reads Per Kbp per Million reads) values, RACKJ computes read counts for exons and splicing events. In so doing, it is feasible to compare two samples and identify genes with most significant difference in exon(splicing)-level.

Project Activity

See All Activity >

Categories

Bio-Informatics

License

GNU Library or Lesser General Public License version 3.0 (LGPLv3)

Follow Read Analysis n Comparison Kit in Java

Read Analysis n Comparison Kit in Java Web Site

Other Useful Business Software
Gen AI apps are built with MongoDB Atlas Icon
Gen AI apps are built with MongoDB Atlas

The database for AI-powered applications.

MongoDB Atlas is the developer-friendly database used to build, scale, and run gen AI and LLM-powered apps—without needing a separate vector database. Atlas offers built-in vector search, global availability across 115+ regions, and flexible document modeling. Start building AI apps faster, all in one place.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of Read Analysis n Comparison Kit in Java!

Additional Project Details

User Interface

Command-line

Programming Language

Java, Perl

Related Categories

Perl Bio-Informatics Software, Java Bio-Informatics Software

Registered

2010-07-29