Windows command line utility calculating protein orthologs using best reciprocal hit from BLAST alignment output
- -d specifies directory with BLAST outputs. All files will be used as input for the ParseBLAST.exe
- -s Similarity cutoff (0.3 is recommended)
- -b Y/N specifies how to calculate orthologs. Y - for best reciprocal hit; N - for all possible homologs above similarity cutoff
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