ngopt

de novo assembly & analysis of Illumina sequence data

Brought to you by: koadman

Add a Review

Downloads: 1 This Week

Last Update: 2016-11-25

Download

Get an email when there's a new version of ngopt

de novo assembly & analysis of Illumina sequence data, including the A5 pipeline, A5-miseq, tools to evaluate assembly quality, and scripts to facilitate data submission to NCBI and the RAST annotation system

Project Samples

Project Activity

See All Activity >

Follow ngopt

ngopt Web Site

Other Useful Business Software

Our Free Plans just got better! | Auth0

With up to 25k MAUs and unlimited Okta connections, our Free Plan lets you focus on what you do best—building great apps.

You asked, we delivered! Auth0 is excited to expand our Free and Paid plans to include more options so you can focus on building, deploying, and scaling applications without having to worry about your security. Auth0 now, thank yourself later.

Try free now

Rate This Project

User Reviews

Be the first to post a review of ngopt!

Additional Project Details

Registered

2014-04-02

Report inappropriate content

Recommended Projects

MIRA
MIRA V5 is available only on GitHub! The V4 version released here on SourceForge stay up as some automated release fetching packages rely on V4. MIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable, uncorrected not yet.
MUMmer
MUMmer is a modular system for the rapid whole genome alignment of finished or draft sequence. This package provides an efficient suffix tree library, seed-and-extend alignment, SNP detection, repeat detection, and visualization tools.
QUAST
Quality Assessment Tool for Genome Assemblies