The Modular Single-set Enrichment Test (MSET) is a randomization testing script written in R that allows the user to statistically assess overrepresentation of any gene list of interest within a list of significant gene results from an expression study.

MSET uses a tcltk graphical user interface and is optimized for use in Windows operating systems. It also works in OS X, but requires the installation of the XQuartz architecture (https://xquartz.macosforge.org/trac/wiki) to enable tcltk. This added complexity can lead to technical difficulties.

UPDATE: An MSET script ("mset_text.R") is now included in the MSET folder which allows users to manually designate input files via a text prompt. This bypasses the need for tcl/tk on OS X, although it is not as fast or easy to use. File names must be entered in quotations, including the .txt extension, and are case sensitive.

Project Activity

See All Activity >

Follow Modular Single-set Enrichment Test

Modular Single-set Enrichment Test Web Site

Other Useful Business Software
MongoDB Atlas runs apps anywhere Icon
MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of Modular Single-set Enrichment Test!

Additional Project Details

Registered

2013-10-30
Report inappropriate content