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Name Modified Size InfoDownloads / Week
WgsMitoCounter-Source-20120721.zip 2012-12-04 34.5 kB
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README.txt 2012-08-11 1.4 kB
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MitoCounter-1.0.1-20120811.zip 2012-08-11 1.6 MB
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MitoCounter-1.0.1-20120211.zip 2012-02-10 1.6 MB
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MitoCounterManual.pdf 2012-02-10 1.7 MB
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MitoCounter-1.0.1-20120208.zip 2012-02-08 45.4 kB
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Totals: 6 Items   5.0 MB 0 
======================================================================================
 * MitoCounter(Beta); tools for Counting mitochondrial DNA fromwgs data
 *
 * Copyright (c) Hsueh-Ting Chu. htchu.taiwan@gmail.com
 * 4F., No.286, Defu Rd., South Dist., Taichung City 402, Taiwan.
 * All rights reserved.
 *
 * This file is a part of the EBARAsm program.
 * The use and distribution terms for this software are covered by the
 * Common Public License 1.0 (http://opensource.org/licenses/cpl1.0.php).
 * By using this software in any fashion, you are agreeing to be bound by
 * the terms of this license. You must not remove this notice, or
 * any other, from this software.

======================================================================================
This package of programs is for the paper:

Counting mitochondrial DNA in human cells from second-generation whole genome sequencing data

by Hsueh-Ting Chu.

The programs are Windows applications run on Windows 7/Windows Server 2008 platforms with .Net 4.0 framework:

WgsMitoAssembler: a simple mapping assembler for mitochondrial DNA with the reference sequence NC_001807.fasta.

WgsMitoCounter: seperation of sequenced reads from mitochondrial DNA with the reference sequence produced by WgsMitoAssembler.

Revision 1 (2012/08/11)
Seperate the templates for female and male samples.
Source: README.txt, updated 2012-08-11