Looking for the latest version? Download miRSeqNovel_1.3.tar.gz (9.1 kB)
Name Modified Size Downloads / Week Status
UserManual.pdf 2012-05-04 199.2 kB 0
result.zip 2011-10-24 1.6 MB 0
examplescript.R 2011-10-24 8.6 kB 0
miRSeqNovel_1.3.tar.gz 2011-10-24 9.1 kB 11 weekly downloads
README.txt 2011-10-24 802 Bytes 0
inputfiles.zip 2011-08-22 4.9 MB 0
human_miRBaseV16.txt 2011-06-15 108.2 kB 0
License 2011-06-15 605 Bytes 0
Totals: 8 Items   6.9 MB 1
miRSeqNovel, an R/Bioconductor based workflow for novel miRNA prediction from deep sequencing data. miRSeqNovel can process data in both colorspace and basespace forms as well as use the results from different mapping algorithms and reference genomes. It gives fast and accurate output which is fully compatible for downstream statistical test in R/Bioconductor. miRSeqNovel is very flexible and completely customizable. How to install Just as a normal R package: R CMD INSTALL miRSeqNovel_1.3.tar.gz Then in R load the library library(miRSeqNovel) An example script is provided in the file "examplescript.R" and also the Usermanual. The package is freely available for non-commercial purposes. For commercial purposes, please contact qiankui at gmail dot com. Further details will be updated soon.
Source: README.txt, updated 2011-10-24

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