MIRA download | SourceForge.net

MIRA V5 is available only on GitHub!

The V4 version released here on SourceForge stay up as some automated release fetching packages rely on V4.

MIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable, uncorrected not yet.

Features

Allows hybrid assemblies of Sanger, 454, Solexa, IonTorrent and PacBio (CCS & ecCLR) data
Can use paired-end and / or unpaired data
Supports ancillary data in TRACEINFO format (from NCBI)
Marks places of interest with tags so that these can be found quickly in finishing programs
Has a SNP analysis pipeline for sequencing data of viruses and procaryonts

Project Activity

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License

GNU General Public License version 2.0 (GPLv2)

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Additional Project Details

Operating Systems

BSD, Linux, Mac

Intended Audience

Advanced End Users, Science/Research

User Interface

Command-line

Programming Language

C++

Related Categories

C++ Bio-Informatics Software

Registered

2009-08-06

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