MIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable, uncorrected not yet.

Features

  • Allows hybrid assemblies of Sanger, 454, Solexa, IonTorrent and PacBio (CCS & ecCLR) data
  • Can use paired-end and / or unpaired data
  • Supports ancillary data in TRACEINFO format (from NCBI)
  • Marks places of interest with tags so that these can be found quickly in finishing programs
  • Has a SNP analysis pipeline for sequencing data of viruses and procaryonts

Project Activity

See All Activity >

Categories

Bio-Informatics

Follow MIRA

MIRA Web Site

Other Useful Business Software

Citizen Development and the Consumerization of IT Citizen Development and the Consumerization of IT Icon
Citizen Development and the Consumerization of IT Icon

How is your organization empowering citizen developers to create their own solutions to improve productivity?

Citizen developers are regular end-users who utilize low-code platforms, which empower them to create or customize applications which they and their colleagues can use, without the input of central IT. Citizen development software can enable any user to build applications or improve the efficiency of their business processes. It’s ultimately about putting more responsibility (and more technological capability) in the hands of workers.

Rate This Project

Login To Rate This Project

User Ratings

★★★★★
★★★★
★★★
★★
4
0
0
0
0
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 5 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 5 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 5 / 5

User Reviews

  • MIRA is definitely an under-appreciated assembler which peforms well on smaller (viral/bacterial) genomes

  • Mira-assembler works wonderful.

    1 user found this review helpful.
  • it is not only the program which is spectacular, but also its author Mr.Chevreux is from outer space. you must definitely give a try.

  • the best assembler so far

Read more reviews >

Additional Project Details

Intended Audience

Advanced End Users, Science/Research

User Interface

Command-line

Programming Language

C++

Registered

2009-08-06