LSDMap

Locally-Scaled Diffusion Maps from molecular dynamics trajectories

Status: Pre-Alpha

Brought to you by: cclementi, ibethune, wenweizheng

Add a Review

Downloads: 0 This Week

Last Update: 2016-11-29

Download

Get an email when there's a new version of LSDMap

Linux

LSDMap is a set of Fortran90 codes parallelised with MPI for the calculation of Locally Scaled Diffusion Maps. The eigenvectors of the diffusion matrix can be used to form a small set of reaction coordinates describing the behaviour of a high-dimensional data set such as an equilibrium MD trajectory.

Project Samples

LSDMap: Free energy landscape of Alanine-12

Project Activity

See All Activity >

Follow LSDMap

LSDMap Web Site

Other Useful Business Software

Fully Managed MySQL, PostgreSQL, and SQL Server

Automatic backups, patching, replication, and failover. Focus on your app, not your database.

Cloud SQL handles your database ops end to end, so you can focus on your app.

Try Free

Rate This Project

User Reviews

Be the first to post a review of LSDMap!

Additional Project Details

Operating Systems

BSD, Linux

Languages

English

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Fortran

Registered

2012-05-23

Report inappropriate content

Try Google Cloud Risk-Free With $300 in Credit

No hidden charges. No surprise bills. Cancel anytime.

Use your credit across every product. Compute, storage, AI, analytics. When it runs out, 20+ products stay free. You only pay when you choose to.

Start Free

Recommended Projects

CamShaft
Calculation of camshafts - allows to define a camshaft profile on the set trajectory which should provide the given mechanism. The trajectory can be set graphically, co-ordinates or function.
4DiCeS
4-Dimensional Cell Simulator (4DiCeS) is a framework on hybrid (stochastic and deterministic) modeling and simulation of (whole) cell environments in 4D. The framework may incorporate any reaction and diffusion algorithms applicable in a 4D grid layout.
DeepMozart
Audio generation using diffusion models
Diffusion Bee
Diffusion Bee is the easiest way to run Stable Diffusion locally
Fachwerk3D
Fachwerk3D calculates three-dimensional strut-and-tie models used by structural engineers for analysing and designing reinforced concrete structures. The program only uses the equilibrium conditions, thus it is not assuming elastic behaviour.