Download
lr2rmats is a Snakemake-based light-weight pipeline which is designed to utilize both third-generation long-read and second-generation short-read RNA-seq data to generate an enhanced gene annotation file. The newly generated annotation file could be provided to rMATS for differential alternative splicing analysis.
More information can be found at https://sourceforge.net/p/lr2rmats/wiki/Home/
Features
- Long read
- RNA-seq
- Alternative splicing
- Pacific Biosciences
- Oxford Nanopore Technologies
Project Samples
Categories
Bio-InformaticsLicense
GNU General Public License version 3.0 (GPLv3)Follow lr2rmats
Other Useful Business Software
AI-powered service management for IT and enterprise teams
Give your IT, operations, and business teams the ability to deliver exceptional services—without the complexity. Maximize operational efficiency with refreshingly simple, AI-powered Freshservice.
Rate This Project
Login To Rate This Project
User Reviews
Be the first to post a review of lr2rmats!