The Interactome-Transcriptome Integration (ITI) algorithm allows the analysis of gene expression data by superimposition of a large scale protein-protein interaction data (human interactome) over several gene expression datasets. ITI extracts regions in the interactome with differentiating expression over two conditions. These subnetworks can that be used to build a generalizable and stable genomic signature for genomic/cancer classification.

Project Activity

See All Activity >

Categories

Bio-Informatics

License

Other License

Follow Interactome Transcriptome Integration

Interactome Transcriptome Integration Web Site

Other Useful Business Software
Gen AI apps are built with MongoDB Atlas Icon
Gen AI apps are built with MongoDB Atlas

Build gen AI apps with an all-in-one modern database: MongoDB Atlas

MongoDB Atlas provides built-in vector search and a flexible document model so developers can build, scale, and run gen AI apps without stitching together multiple databases. From LLM integration to semantic search, Atlas simplifies your AI architecture—and it’s free to get started.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of Interactome Transcriptome Integration!

Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Healthcare Industry

User Interface

Web-based

Programming Language

Perl

Related Categories

Perl Bio-Informatics Software

Registered

2008-11-27