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ReadMe.md 2013-11-15 2.6 kB
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ij-plugins_toolkit-nodep_bin_1.8.0_r1396.zip 2013-11-15 301.5 kB
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ij-plugins_toolkit_javadoc_1.8.0_r1396.zip 2013-11-15 25.0 kB
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ij-plugins_toolkit_bin_1.8.0_r1396.zip 2013-11-15 723.7 kB
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ij-plugins_toolkit_src_1.8.0_r1396.zip 2013-11-15 4.8 MB
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Totals: 5 Items   5.8 MB 2

ij-plugins Toolkit Release Notes v.1.8.0

IJ Plugins Toolkit is a set of ImageJ plugins.

New: * Plugin to convert Lab stack to XYZ color space * Plugin to convert XYZ stack to Lab color space

Improved: * Create color space stacks, like Lab*, have now slices labeled using band names rather than numbers

Developer visible: * KMeans verifies that input stack is of correct type * CubicSplineFunction is now part of ij-plugins toolkit, moved from ij-VTK

Requirements:

  • Java 7 or better.

Release Files

  • ij-plugins_toolkit_bin_1.8.0_r????.zip - main binaries including all dependencies. To install unzip to ImageJ plugins directory.

  • ij-plugins_toolkit-nodep.jar - binaries without dependencies. Needed dependencies:

    • JGoodies Binding 2.6.0.
    • JGoodies Common 1.3.0.
    • Jakarta Commons BeanUtils 1.8.3.
    • Jakarta Commons Logging 1.1.1.

  • ij-plugins_toolkit_src_1.8.0_r????.zip - sources, includes dependencies.

Installation

Uncompress content of ij-plugins_toolkit_bin_*.zip to ImageJ's plugins directory. You can find location of ImageJ plugins directory by selecting in ImageJ "Plugins"/"Utilities"/"ImageJ Properties", look for value of tag "plugins dir" near the bottom of the displayed Properties' window.

Plugins

There are 28 plugins in this release:

  • 3D IO

    • MetaImage Reader
    • MetaImage Writer
    • VTK Reader
    • VTK Writer
    • Export as STL

  • 3D Toolkit

    • Connected Threshold Grower
    • Auto Clip Volume
    • Morphological Dilate 3D
    • Morphological Erode 3D
    • Median 3D

  • Color (and miltiband images)

    • Lab* stack to RGB
    • Lab* stack to XYZ stack
    • RGB to Lab* stack
    • RGB to XYZ stack
    • RGB to YCbCr stack
    • YCbCr stack to RGB
    • XYZ stack to Lab*
    • XYZ stack to RGB
    • Measure Bands
    • Multiband Sobel edges
    • Multiband Difference edges
    • Multiband Gradient edges
    • Intensity shift

  • Filters

    • Coherence Enhancing Diffusion
    • Fast Median
    • Perona-Malik Anisotropic Diffusion
    • Directional Coherence
    • Speckle Reducing Anisotropic Diffusion

  • Graphics

    • Image Quilter

  • Segmentation

    • k-means Clustering
    • Maximum Entropy Threshold
    • Maximum Entropy Multi-Threshold
    • Seeded Region Growing Tool ...
    • Seeded Region Growing ...
    • Set Pixels
Source: ReadMe.md, updated 2013-11-15