HIVCD Icon

HIVCD

Informatics tool for contamination screening in the HIV sequencing lab

Add a Review
0 Downloads (This Week)
Last Update:
Download HIV_Contamination_Detection.tar.gz
Browse All Files

Screenshots

Description

HIVCD is an informatics tool developed to identify patient sequences that are too similar to happen by chance alone. Highly similar sequences are likely to occur from contamination or other situations like geographic linkage. Full details can be found in our paper titled "Application of a new informatics tool for contamination screening in the HIV sequencing laboratory"

The code provided is a simple user interface to the underlying algorithm. We provide it as a convenience but it comes with absolutely no warranty as stated in the Apache License, Version 2.0.

HIVCD Web Site

Categories

License

Apache License V2.0

KEEP ME UPDATED

Write a Review

User Reviews

Be the first to post a review of HIVCD!

Additional Project Details

Programming Language

Java, Perl

Registered

2013-01-04

Thanks for helping keep SourceForge clean.

Screenshot instructions:
Windows
Mac
Red Hat Linux   Ubuntu

Click URL instructions:
Right-click on ad, choose "Copy Link", then paste here →
(This may not be possible with some types of ads)

More information about our ad policies
X

Briefly describe the problem (required):

Upload screenshot of ad (required):
Select a file, or drag & drop file here.

Please provide the ad click URL, if possible:

Get latest updates about Open Source Projects, Conferences and News.

Sign up for the SourceForge newsletter:

No, thanks