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A Tool for Qualitative and Quantitative Modeling of Gene Regulatory Networks. GenNet is a Java based tool called that facilitate the model checking user by providing a unique GUI layout for both qualitative and quantitative modeling of GRNs. GenNet also assists the modeling users by providing some extra features i.e. CTL editor, parameters filtering and input/output files management.
Download pre-installed GenNet Virtual Box Image here https://www.dropbox.com/s/9ryvs1f22zc181y/GenNet-1.3.28.ova?dl=0
Features
- Qualitative Modeling
- Quantitative Modeling
- GRN creation
- GRN loading
- CTL verification
- K-Parameters
- State graph
- Cyclic states
- Steady states
- Paths
- Hybrid Model
- Time delays
- Path constraints
- Invariant Kernal
- Complete GUI based
- No manual effort
- Fast results
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