GeneRFinder-Benchmark

Brought to you by: padovani, railorena

Downloads: 0 This Week

Last Update: 2020-08-20

Get an email when there's a new version of GeneRFinder-Benchmark

The GeneRFinder-Benchmark is a comprehensive benchmark data for gene prediction which is based on data of CAMI (Critical Assessment of Metagenome Interpretation) and contains labeled data from gene regions.

The benchmark is made up of 9 datasets. For each one of them is provided:
- List of names, taxonomy ID and taxonomic level of the genomes of the organisms that make up the dataset (genomes.csv)
- Set of sequences extracted from the respective selected genomes (sequences.fasta)
- Ground truth for each of the extracted ORFs (groundtruth.csv)

For information about download, see the documentation.

Project Activity

See All Activity >

Follow GeneRFinder-Benchmark

GeneRFinder-Benchmark Web Site

Other Useful Business Software

MongoDB Atlas runs apps anywhere Icon

MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.

Start Free

Rate This Project

Login To Rate This Project

User Reviews

Be the first to post a review of GeneRFinder-Benchmark!

Additional Project Details

Registered

2020-01-27

Report inappropriate content

Recommended Projects

SSD Benchmark
SSD Benchmark is a Windows application for testing the performance of your SSD disk.
MCScanX
MCScanX: Multiple Collinearity Scan toolkit X version
AIM Benchmarks
Suite VII is the "AIM Multiuser Benchmark:" a well known, industry standard application benchmark. Suite IX is the "AIM Independent Resource Benchmark:" the famous synthetic benchmark. Performance metrics produced by these benchmarks are not certified.
Database Benchmark
The project is moved to GitHub: https://github.com/STSSoft/DatabaseBenchmark. We will continue to upload the source and binaries here, but the code repository will be innactive. Database Benchmark is one of the most powerfull open source tools designed to stress test database management systems with large data flows. The application performs two main test scenarios: - Insertion of large amount of randomly generated records with sequential or random keys; - Read of the inserted records, ordered by their keys. Database Benchmark can be used as an additional viewpoint when the research engineers or software architects asses the appropriate background storage engine for their mission critical systems. The application contains useful tools that make it easy to test and evaluate the different solutions.
mdtest HPC Benchmark
mdtest is an MPI-coordinated metadata benchmark test that performs open/stat/close operations on files and directories and then reports the performance.