DESCRIPTION:

Program: GENBLOSUMxx-Generation of BLOCK substitution Matrix of least Identity Score xx
Version:version 1
Author:Rifat Nawaz UL Islam, Arnab Nayek, Buddhadev Mondal, Shyamashree Banerjee,
Parth Sarthi Sen Gupta and Amal Kumar Bandyopadhyay*
Department of Biotechnology, The University of Burdwan

Features

  • Finds minimum paired identity score for each block
  • Compute bit-score in 20x20 format and properties from each block
  • Computes average BLOSUMxx matrix where xx if the average min identity score
  • List blocks properties and 20x20 bit-score mat in excel table and on the screen
  • The program run from any UNIX/LINUX/CYGWIN shell

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2014-08-17
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