FCGRGen

FCGRGen is a user-friendly tool for generating Frequency Chaos Game Representation (FCGR) images of genomic sequences. It takes input genomic sequences in FASTA file format and provides an easy-to-use interface for specifying the value of k (the length of oligonucleotides) and generating FCGR images. • Input genomic sequences in FASTA file format. • Browse button for selecting the input file. • Browse button for selecting the output folder. • Specify the value of k for FCGR generation. • Generate FCGR images for input sequences. • Intuitive user interface for ease of use. Usage • Run the FCGRGen executable.

Features

k-mer Flexibility: Tailor analysis by adjusting k-mer length (k).
Batch Processing: Analyze multiple sequences simultaneously.
Unveiling Secrets: Identify hidden features and gain insights into biological phenomena.
Bioinformatics Powerhouse: A versatile platform for nucleotide pattern investigation.
For Researchers By Researchers: Accelerate discoveries and unravel genomic complexity.
Free & Open Source: Accessible to all, empowering research advancement.

Project Samples

FCGR image for k=3 for gene, accA in E.coli

Project Activity

See All Activity >

License

GNU General Public License version 3.0 (GPLv3)

Follow FCGRGen

FCGRGen Web Site

Other Useful Business Software

MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.

Start Free

Rate This Project