FCGRGen

FCGRGen is a user-friendly tool for generating Frequency Chaos Game Representation (FCGR) images of genomic sequences. It takes input genomic sequences in FASTA file format and provides an easy-to-use interface for specifying the value of k (the length of oligonucleotides) and generating FCGR images. • Input genomic sequences in FASTA file format. • Browse button for selecting the input file. • Browse button for selecting the output folder. • Specify the value of k for FCGR generation. • Generate FCGR images for input sequences. • Intuitive user interface for ease of use. Usage • Run the FCGRGen executable.

Features

k-mer Flexibility: Tailor analysis by adjusting k-mer length (k).
Batch Processing: Analyze multiple sequences simultaneously.
Unveiling Secrets: Identify hidden features and gain insights into biological phenomena.
Bioinformatics Powerhouse: A versatile platform for nucleotide pattern investigation.
For Researchers By Researchers: Accelerate discoveries and unravel genomic complexity.
Free & Open Source: Accessible to all, empowering research advancement.

Project Samples

FCGR image for k=3 for gene, accA in E.coli

Project Activity

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License

GNU General Public License version 3.0 (GPLv3)

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FCGRGen Web Site

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