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Home / Sample Reads
Name Modified Size InfoDownloads / Week
Parent folder
READS_README.txt 2013-01-10 574 Bytes
0
Mesoplasma_Reverse_eloped.fa 2013-01-10 823.9 kB
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Mesoplasma_Reverse.fa 2013-01-10 8.6 MB
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Mesoplasma_Forward_eloped.fa 2013-01-10 825.9 kB
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Mesoplasma_Forward.fa 2013-01-10 8.6 MB
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Phages_raw_reads_interleaved.fa 2013-01-10 31.2 MB
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Phages_eloped_reads_interleaved.fa 2013-01-10 29.0 MB
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Totals: 7 Items   79.1 MB 0 
MESOPLASMA:

The command used to produce the elongated reads is:
Eloper -i1 Mesoplasma_Forward.fa -i2 Mesoplasma_Reverse.fa -o1 Mesoplasma_Forward_eloped.fa -o2 Mesoplasma_Reverse_eloped.fa -md10 -ms20 -ml10 -vmn -mab -fy -un -an

This Mesoplasma reads' file is of 20x coverage. Extract subsets to try it with smaller coverages.

The library consists of paired-end reads of insert sizes randomally distributed around 250bp±20sd.


PHAGES:

The elongated reads are presented in the same order as the raw reads. This allows examination of the elongation process.
Source: READS_README.txt, updated 2013-01-10