| Name | Modified | Size | Downloads / Week |
|---|---|---|---|
| Parent folder | |||
| readme.txt | 2012-05-30 | 361 Bytes | |
| filter_and_summary.pl | 2012-05-30 | 8.7 kB | |
| sam_to_pileup.py | 2012-05-30 | 8.0 kB | |
| error_profile_pois.pl | 2012-05-30 | 4.7 kB | |
| Dreep_result_filter.pl | 2012-05-30 | 4.3 kB | |
| error_profile_emp.pl | 2012-05-30 | 6.7 kB | |
| Dreep_poisson.pl | 2012-05-30 | 9.4 kB | |
| Dreep_emp.pl | 2012-05-30 | 5.8 kB | |
| Dreep_fisher.pl | 2012-05-30 | 8.5 kB | |
| Totals: 9 Items | 56.6 kB | 0 | |
v0.6 Fisher Exact test (-r) is added in Dreep_result_filter.pl (to test the violation of the number of Major allele and Minor allele on different strands) If you want to skip some files (due to possible contamination), you can creat a text file including all the sample IDs that should be skipped (one ID per line), and input the file name after the option -q
