DIAFree

a workflow use to identify and quantify protein from DIA

Brought to you by: xuesu

Downloads: 0 This Week

Last Update: 2020-08-30

Get an email when there's a new version of DIAFree

# DIAFree

DIAFree is a workflow use to identify and quantify protein from spectra(.raw/.mzML).

Please alter basic.ini to reset the environments and then click on DIAFreeGUI.exe, then you are free to use!

spectra lib & predicted spectra lib(use pDeep) are unable to use only because I do not finish the UI logic yet.

This is a simple introduction because network issues make Upload To Github unable to finish!

Please download it from:

Features

Data-Independent Acquisition
Proteomics
Identification
Quantification

Project Activity

See All Activity >

Follow DIAFree

DIAFree Web Site

Other Useful Business Software

Host LLMs in Production With On-Demand GPUs Icon

Host LLMs in Production With On-Demand GPUs

NVIDIA L4 GPUs. 5-second cold starts. Scale to zero when idle.

Deploy your model, get an endpoint, pay only for compute time. No GPU provisioning or infrastructure management required.

Try Free

Rate This Project

Login To Rate This Project

User Reviews

Be the first to post a review of DIAFree!

Additional Project Details

Registered

2020-08-30

Report inappropriate content

Featured

Host LLMs in Production With On-Demand GPUs

NVIDIA L4 GPUs. 5-second cold starts. Scale to zero when idle.

Deploy your model, get an endpoint, pay only for compute time. No GPU provisioning or infrastructure management required.

Try Free

Recommended Projects

Raman Tool Set
Analysis of Raman spectra and spectroscopy data.
Burrow-owl
Burrow-owl is a software package for visualizing multidimensional nuclear magnetic resonance (NMR) spectra, with an emphasis on spectra used in macromolecular structure determination.
SpectralWorks
View, manipulate, analyze (LS fit, SVD, FT), and make figs of, spectra
nmrshiftdb2
nmrshiftdb2 is a NMR database (web database) for organic structures and their nuclear magnetic resonance (nmr) spectra. It allows for spectrum prediction (13C, 1H and other nuclei) as well as for searching spectra, structures and other properties. The nmrshiftdb2 software is open source, the data is published under an open content license. The core of nmrshitdb2 are fully assigned spectra with raw data and peak lists (we have pure peak lists as well). Those datasets are peer reviewed by a board of reviewers. The project is supported by a scientific advisory board. nmrshiftdb2 is part of the NFDI4Chem initiative (https://nfdi4chem.de/) and will provide a component for a curated repository there. Please consult the documentation for more detailed information.
protein-ms
Tools for mass spectrometry, especially for protein mass spectrometry and proteomics: Quantification tools, converters for Applied Biosystems (Q Star and Q Trap), calculation of in-silico fragmentation spectra, converter for Mascot result files