CUDASW++ software is a public open source software for Smith-Waterman protein database searches on Graphics Processing Units with CUDA. This software have been added to the NVIDIA Tesla Bio Workbench (http://www.nvidia.com/object/swplusplus_on_tesla.html

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Bio-Informatics

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User Reviews

  • We have already removed the code dependency on CUDA SDK, and the software can be directly compiled using CUDA 5.0 and higher versions.

  • This has NOT been updated for beyond CUDA 4.1. Cutil.h is no longer in CUDA since CUDA 5.0. Now here we are on CUDA 6.0! Please update this software.

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Additional Project Details

Intended Audience

Developers

User Interface

Command-line

Programming Language

C

Registered

2009-02-09