Looking for the latest version? Download CONTRA.v2.0.8.tar.gz (905.9 kB)
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Name Modified Size Downloads / Week Status
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CONTRA.v2.0.8.tar.gz 2016-03-29 905.9 kB 1111 weekly downloads
README.txt 2016-03-29 508 Bytes 0
CONTRA.v2.0.6.tar.gz 2014-11-18 3.1 MB 0
CONTRA.v2.0.4.tar.gz 2013-05-16 3.1 MB 0
CONTRA.v2.0.3.tar.gz 2012-07-24 3.1 MB 0
CONTRA.v2.0.2.tar.gz 2012-01-31 3.1 MB 0
CONTRA.v2.0.1.tar.gz 2011-10-31 3.1 MB 0
CONTRA.v2.0.tar.gz 2011-10-17 3.1 MB 0
Totals: 8 Items   19.6 MB 11
Full documentation is available at http://contra-cnv.sourceforge.net. v2.0.8 Included NDE and WGCNV workflows. Removed FASTA dependency. Removed VCF support. Removed PDF file. Updated online documentation. v2.0.7 Added --version v2.0.6 Added option to remove Duplicates v2.0.4 Fixed a bug with "chr" named chromosomes in cn_apply_threshold Catch errors with bam files do not contain reads in a targeted chromosome. v2.0.3 Fixed baseline.py scalability to large sample size Now compatable with R2.14+
Source: README.txt, updated 2016-03-29

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