Coarse-grained modeling Files

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Name	Modified	Size	InfoDownloads / Week
Parent folder
README.txt	2022-02-10	609 Bytes	0
opti_fmincon_ensemble.mat	2022-02-10	1.7 kB	0
simu_system_ensemble.m	2022-02-10	2.1 kB	0
plot_s.m	2022-02-10	922 Bytes	0
opti_fmincon_polynom.mat	2022-02-10	216 Bytes	0
parameter.m	2022-02-10	601 Bytes	0
simu_opti.m	2022-02-10	2.1 kB	0
simu_standard.m	2022-02-10	1.9 kB	0
opti_fmincon_piecewise.mat	2022-02-10	232 Bytes	0
simu_system_fed_batch.m	2022-02-10	3.3 kB	0
Totals: 10 Items		13.7 kB	0

README
The files in the folder reproduce Figures 4, 11 and 12 in the publication; however, optimization results for the feeding are not produced but are stored in *.mat files.
Figure 4
simu_standard.m   simulates the model for various substrate concentrations input with standard parameter
simu_opti.m  runs an optimization program to max growth rate
(both files need plot_s and parameter)

Figure 11
simu_system_fed_batch.m simulates three cases with different feeding profiles 

Figure 12
simu_system_ensemble simulates the system with different parameters, input function was stored before

Source: README.txt, updated 2022-02-10

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