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CisPlusFinder

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A comparative genomics method for finding cis-regulatory modules

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Description

CisPlusFinder predicts cis-regulatory modules based on perfect local ungapped sequences using comparative sequence data from multiple organisms. An overview of the CisPlusFinder can be found in the flowchart.tif file and is described in the following publication:

Pierstorff, N., C.M. Bergman & T. Wiehe. (2006) Identifying cis-regulatory modules by combining comparative and compositional analysis of DNA. Bioinformatics 22:2858-2864.

http://www.ncbi.nlm.nih.gov/pubmed/17032682

CisPlusFinder Web Site

Categories

Bio-Informatics

License

BSD License

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Additional Project Details

Intended Audience

Science/Research

Programming Language

Perl, C

Registered

2012-02-20

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