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CIRI_Full_v2.1.1.jar (76.1 kB)
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| Name | Modified | Size | Downloads / Week |
|---|---|---|---|
| Parent folder | |||
| CIRI_v2.0.6.zip | 2017-06-13 | 4.3 MB | |
| README.txt | 2017-03-02 | 660 Bytes | |
| CIRI2_article.pdf | 2017-03-01 | 809.7 kB | |
| Figure3.pdf | 2017-03-01 | 117.4 kB | |
| CIRI_v2.0.5.zip | 2017-01-03 | 4.3 MB | |
| CIRI_v2.0.4.zip | 2016-12-08 | 29.1 kB | |
| CIRI_v2.0.3.zip | 2016-08-23 | 29.1 kB | |
| CIRI_v2.0.2.zip | 2016-04-19 | 29.5 kB | |
| CIRI_v2.0.1.zip | 2016-01-15 | 28.1 kB | |
| test_data2.zip | 2016-01-15 | 84.1 MB | |
| Totals: 10 Items | 93.7 MB | 17 | |
What's new in CIRI2? 1. CIRI2 supports multi-thread and is convenient for large data set. 2. CIRI2 supports variable read lengths and can process combined data sets after trimming. 3. CIRI2 outputs strand of predicted circRNAs. More details please refer to manual of CIRI2. If you use CIRI2, please cite the following papers: 1. Yuan Gao†, Jinfeng Wang† and Fangqing Zhao*. CIRI: an efficient and unbiased algorithm for de novo circular RNA identification. Genome Biology (2015) 16:4. 2. Yuan Gao, Jinyang Zhang and Fangqing Zhao*. Circular RNA identification based on multiple seed matching. Briefings in Bioinformatics (2017) DOI: 10.1093/bib/bbx014.