CircularLogo - Browse /test at SourceForge.net

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Name	Modified	Size	InfoDownloads / Week
Parent folder
random_DNA.fa	2017-04-13	43.9 kB	0
splicing_synthsites.fa.gz	2017-04-13	251.2 kB	0
README.txt	2016-11-11	611 Bytes	0
tRNA_291.fa.gz	2016-11-11	7.8 kB	0
HNF6.25mer.ext20mer.fa.gz	2016-11-11	171.9 kB	0
Totals: 5 Items		475.4 kB	0

Procedures to reproduce figures in our manuscript:
1) Downlooad "tRNA_291.fa.gz" and "HNF6.25mer.ext20mer.fa.gz"
2) Uncompress them by typing "gunzip tRNA_291.fa.gz" and "gunzip HNF6.25mer.ext20mer.fa.gz" (or you can use other tools to do uncompress)
3) Upload "tRNA_291.fa" or "HNF6.25mer.ext20mer.fa" to our webserver (http://bioinformaticstools.mayo.edu/circularlogo/index.html) or CircularLogo deployed on your local computer (such as http://localhost:8000/circularlogo/index.html). 
4) Select "mutual information" as Method
5) Adjust slider bar to filter out weak links that representing background noise.

Source: README.txt, updated 2016-11-11

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