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This PERL script was used in the study by Marine et. al (2013)* to calculate average sequence read coverage of each predicted ORF within a phage genome.
*See the following open-access publication for more detail: Marine, R., C. McCarren, V. Vorrasane, D. Nasko, E. Crowgey, S. W. Polson, K. E. Wommack. 2013. Caught in the middle with multiple displacement amplification: The myth of pooling for avoiding MDA bias in a metagenome. Microbiome. Submitted
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