Name | Modified | Size | Downloads / Week |
---|---|---|---|
Readme.txt | 2011-04-04 | 849 Bytes | |
Motifs.pl | 2011-04-04 | 151.3 kB | |
lengths.pl | 2011-04-04 | 1.7 kB | |
SwissProtParser_1.0.zip | 2011-04-04 | 69.0 kB | |
ProteinSearch_1.0.zip | 2011-04-04 | 71.0 kB | |
GenBankParser_1.0.zip | 2011-04-04 | 109.3 kB | |
AlignHits_0.9.zip | 2011-04-04 | 136.8 kB | |
GenBankParser_0.01.zip | 2011-03-12 | 109.3 kB | |
Totals: 8 Items | 649.1 kB | 0 |
The BioTools are complete BioInformatics programs. Database Searching and Alignment Tools: ProteinSearch - searches a list of protein FASTA databases with for protein sequences. - this program can identify evolutionarily related sequences deep into the twilight zone (as low as 5% sequence identity). AlignHits - generates protein multiple sequence alignments from ProteinSearch results - this program can align more than 20,000 protein sequences! Parser Tools: GenBankParser - GenBank source file parser; generates FASTA files SwissProtParser - SwissProt source file parser; generates FASTA file Utilities: lengths.pl - summarizes the lengths of sequences in a FASTA sequences file. Motifs.pl - identifies Prosite motifs in a protein FASTA sequences file.