BayesRate Icon

BayesRate

Bayesian estimation of diversification rates

5.0 Stars (2)
7 Downloads (This Week)
Last Update:
Download BayesRate1.65.zip
Browse All Files
Windows Mac Linux

Description

BayesRate is a program to estimate speciation and extinction rates from dated phylogenies in a Bayesian framework.
The methods are described in:

Silvestro, D., Schnitzler, J. and Zizka, G. (2011) A Bayesian framework to estimate diversification rates and their variation through time and space. BMC Evolutionary Biology, 11, 311

Silvestro D., Zizka G. & Schulte K. (2014) Disentangling the effects of key innovations on the diversification of Bromelioideae (Bromeliaceae). Evolution, 68, 163-175.

BayesRate Web Site

Features

  • Since version 1.64 BayesRate requires Dendropy v. 4 (v. 3 no longer supported)
  • Since version 1.3, Python library DendroPy is required instead of rpy2
  • Added BiSSE-BMA since version 1.5 (Silvestro et al. 2013; DOI: 10.1111/evo.12236)

KEEP ME UPDATED

User Ratings

★★★★★
★★★★
★★★
★★
2
0
0
0
0
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
Write a Review

User Reviews

  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Very useful. Thanks.

    Posted 05/19/2013
  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    works perfectly.

    Posted 03/26/2012
Read more reviews

Additional Project Details

Programming Language

Python, S/R

Registered

2011-09-11

Thanks for helping keep SourceForge clean.

Screenshot instructions:
Windows
Mac
Red Hat Linux   Ubuntu

Click URL instructions:
Right-click on ad, choose "Copy Link", then paste here →
(This may not be possible with some types of ads)

More information about our ad policies
X

Briefly describe the problem (required):

Upload screenshot of ad (required):
Select a file, or drag & drop file here.

Please provide the ad click URL, if possible:

Get latest updates about Open Source Projects, Conferences and News.

Sign up for the SourceForge newsletter:

No, thanks
Screenshots can attract more users to your project.
Features can attract more users to your project.