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amazon-genomics-cli-1.6.0.zip (55.6 MB)
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| Name | Modified | Size | Downloads / Week |
|---|---|---|---|
| Parent folder | |||
| amazon-genomics-cli-1.5.0.zip.sig | 2022-05-25 | 543 Bytes | |
| amazon-genomics-cli-1.5.0.zip | 2022-05-25 | 47.0 MB | |
| README.md | 2022-05-25 | 2.3 kB | |
| v1.5.0.tar.gz | 2022-05-25 | 3.7 MB | |
| v1.5.0.zip | 2022-05-25 | 4.1 MB | |
| Totals: 5 Items | 54.7 MB | 0 | |
Features
- CWL support with Toil https://github.com/aws/amazon-genomics-cli/pull/422, https://github.com/aws/amazon-genomics-cli/pull/431, https://github.com/aws/amazon-genomics-cli/pull/423, https://github.com/aws/amazon-genomics-cli/pull/424, https://github.com/aws/amazon-genomics-cli/pull/425, https://github.com/aws/amazon-genomics-cli/pull/426, https://github.com/aws/amazon-genomics-cli/pull/439, https://github.com/aws/amazon-genomics-cli/pull/441, https://github.com/aws/amazon-genomics-cli/pull/460, https://github.com/aws/amazon-genomics-cli/pull/464, https://github.com/aws/amazon-genomics-cli/pull/465
- BYO VPC can use selected subnets https://github.com/aws/amazon-genomics-cli/pull/436
- Specify a default custom AMIs for all contexts on activation https://github.com/aws/amazon-genomics-cli/pull/451
- Use token provider for MFA profiles https://github.com/aws/amazon-genomics-cli/pull/231
Bug Fixes
- Input files should be resolved as relative to the location of the inputs JSON file https://github.com/aws/amazon-genomics-cli/pull/429
- Re-activation of an activated account deletes VPC https://github.com/aws/amazon-genomics-cli/pull/432
- UX regressions where CDK logs show when --verbose flag is not used https://github.com/aws/amazon-genomics-cli/pull/447
- Enforce GO111MODULE=on for the build https://github.com/aws/amazon-genomics-cli/pull/457
- Removed duplicate example "haplotype" from wdl examples https://github.com/aws/amazon-genomics-cli/pull/427
- Improve examples stability https://github.com/aws/amazon-genomics-cli/pull/419
- Update words with vowels to have the same "shape" as haplotype caller https://github.com/aws/amazon-genomics-cli/pull/438
- Add nextflow port of demo words-with-vowels workflow https://github.com/aws/amazon-genomics-cli/pull/440
Documentation
- Added details about workflow filesystems https://github.com/aws/amazon-genomics-cli/pull/372
- Update CLI reference generation instructions https://github.com/aws/amazon-genomics-cli/pull/417
- Update docs on VPC endpoints https://github.com/aws/amazon-genomics-cli/pull/437
- Typos https://github.com/aws/amazon-genomics-cli/pull/428
Full Changelog: https://github.com/aws/amazon-genomics-cli/compare/v1.4.0...v1.5.0
