Ymap - Yeast Mapping Analysis Pipeline Code

Pipeline for large-scale genome changes analysis of genome datasets.

Status: Beta

Brought to you by: darrenabbey

Tree [167d50] master / History

File	Date	Author	Commit
Matlab	2015-01-28	Darren Abbey	[167d50] Updated smooth_Gaussian.m scripts in different ...
bugtracker	2015-01-17	Vladimir Gritsenko	[d562d4] Cleared the bug list file - had old data with a...
css	2015-01-20	Vladimir Gritsenko	[46ca87] Purged the remaining 'old' directories.
images	2015-01-17	Darren Abbey	[52a280] Major update
js	2015-01-20	Vladimir Gritsenko	[46ca87] Purged the remaining 'old' directories.
php	2015-01-20	Vladimir Gritsenko	[46ca87] Purged the remaining 'old' directories.
py	2015-01-17	Vladimir Gritsenko	[a36bc7] Fixes for installing a reference genome (A21, d...
sh	2015-01-21	Darren Abbey	[dc6203] Revert to 84047b
user_backup	2015-01-17	Darren Abbey	[52a280] Major update
.gitignore	2015-01-21	Darren Abbey	[05b0eb] Added "completion_times.log" to .gitignore file.
YMAP_User_Manual.docx	2014-09-30	Darren Abbey	[00f82c] Updates in response to reviewer comments.
bug.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
bug.test.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
bug_window.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
genome.create.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
genome.create_window.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
genome.working.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
hapmap.addTo.php	2014-07-03	Darren Abbey	[47f26c] Initial commit
hapmap.create.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
hapmap.create_window.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
hapmap.finalize.php	2014-07-03	Darren Abbey	[47f26c] Initial commit
hapmap.working.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
images.combine.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
index.php	2015-01-17	Darren Abbey	[52a280] Major update
panel.admin.php	2015-01-17	Darren Abbey	[52a280] Major update
panel.bugs.php	2014-11-26	Darren Abbey	[2ddd5b] Updated "Bug Reporting" tab to indicate admin d...
panel.examples.php	2014-09-30	Darren Abbey	[00f82c] Updates in response to reviewer comments.
panel.genome.php	2014-09-30	Darren Abbey	[00f82c] Updates in response to reviewer comments.
panel.hapmap.php	2014-09-30	Darren Abbey	[00f82c] Updates in response to reviewer comments.
panel.help.php	2015-01-17	Darren Abbey	[52a280] Major update
panel.manageDataset.php	2014-09-30	Darren Abbey	[00f82c] Updates in response to reviewer comments.
panel.user.php	2014-09-30	Darren Abbey	[00f82c] Updates in response to reviewer comments.
panel.visualizeDataset.php	2014-10-16	Darren Abbey	[1dd5c5] Major updates.
project.create.php	2014-09-30	Darren Abbey	[00f82c] Updates in response to reviewer comments.
project.create_window.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
project.working.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
register.php	2014-07-07	Darren Abbey	[cc3048] Updated description text displayed during new u...
statusUpdate.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
status_log.txt	2014-07-03	Darren Abbey	[47f26c] Initial commit
uploader.1.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
uploader.2.php	2014-07-03	Darren Abbey	[47f26c] Initial commit
uploader.4.php	2014-07-03	Darren Abbey	[47f26c] Initial commit
user.delete.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
user.login.php	2014-09-22	Darren Abbey	[d57fa5] Updates to major user-interface revision.
user.register.php	2014-11-26	Darren Abbey	[3dd35a] Update user registration function to accept an ...

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Matlab

2015-01-28