[XMLPipeDB-developer] UniProt import error Shewanella

[Kam D. <kda...@lm...>]

>
>Hi Dondi,
>
>One of the BioQUEST participants was interested in exporting a gdb 
>for Shewanella oneidensis, taxon ID 
><http://www.uniprot.org/taxonomy/211586>211586 .  So, I went ahead 
>and did it, testing report 
>here: 
>http://xmlpipedb.sourceforge.net/wiki/index.php/Gene_Database_Testing_Report_S._oneidensis_MR-1_2015-06-14#Export_Information
>
>I was able to do an import/export cycle, but the UniProt XML file 
>only loaded partially, 350 out of 4068 entries.  There is a 
>screenshot of the error in the console window on the wiki referenced above.
>
>Would you be able to take a look at this?  I'll LionShare the source files.
>
>If I get a chance, I'll try Vibrio just to see if this is a species 
>problem or a general UniProt problem.
>
>Thanks,
>Kam