Re: [XMLPipeDB-developer] Summer 2011 - ok, breaktimes over =D

[Richard B. <rbr...@gm...>]

I'm in the conf call but it seems to be running very slowly, eventually the
voice prompt told me to enter the PIN #.

rb

On Tue, May 31, 2011 at 12:25 PM, Richard Brous <rbr...@gm...> wrote:

> I'm not sure anyone specific needs to initiate the call but i'll get on a
> few minutes early and log in jic.
>
> rb
>
>   On Tue, May 31, 2011 at 11:59 AM, John David N. Dionisio <do...@lm...>wrote:
>
>> OK, got that.  Just to confirm --- you're the one initiating this call,
>> with Dr. Dahlquist and me as participants, yes?
>>
>> Talk to you Wednesday at 10am then.
>>
>> John David N. Dionisio, PhD
>> Associate Professor, Computer Science
>> Loyola Marymount University
>>
>>
>>
>> On May 31, 2011, at 9:58 AM, Richard Brous wrote:
>>
>> > OK, lets try this con call service with a CA dialing number for the call
>> using the below info.
>> >
>> > Talk to you 10am tomorrow.
>> >
>> > rb
>> >
>> >
>> >
>>  > Welcome to Rondee! You're now all set to go. Please see your On Demand
>> dial-in number and PIN in the green box below.
>> >
>> > Your dial-in number: (916) 209-4534
>> >
>> > Alternative dial-in: (619) 276-6333
>> >
>> > On Demand PIN for you and your participants: 7387949
>> >
>> > You are now ready to start using Rondee! Just give your participants the
>> dial-number and PIN and let them know when to call in.
>> >
>> >
>> >
>> >
>> > On Thu, May 26, 2011 at 5:32 PM, Kam Dahlquist <kda...@lm...>
>> wrote:
>> > Hi Rich,
>> >
>> > Next Wednesday at 10 works for me and Dondi, and will probably work
>> every week, but we can confirm when we get on the phone.
>> >
>> > How are we going to do the call?  Dondi has to be at home and I will be
>> at work at that time.  We can use the free conference call system that we
>> used before, but it is a long-distance number.
>> >
>> > Best,
>> > Dr. D
>> >
>> >
>> > At 09:42 AM 5/26/2011, Richard Brous wrote:
>> >> I'll suggest Wednesdays at 10am for a weekly call?
>> >>
>> >> A back and forth with Dr. Dorin to discuss where to fit the ongoing
>> work into my degree requirements is underway at the moment.
>> >>
>> >> Here is the list of enhancements from my end of semester paper:
>> >>
>> >> PRIORITY OF FUTURE FEATURES AND ENHANCEMENTS
>> >>      • After a clarifying discussion with Dr. Dahlquist, it seems that
>> based on customer need and overall feature direction, that multiple species
>> exports should be the highest priority going forward. Based on this fact, I
>> submit the below list in priority order for discussion.
>> >>      • Baseline check against balance of species
>> >>              • Ms, Mt, Pf(source taxon issue), Pa, and Sa have been
>> successfully exported post merge
>> >>      • Some amount of commented code cleanup left in generic species,
>> UniProt profile, and overall name2taxon implementation. Also cleanup of non
>> commented constructor and methods referencing species name.
>> >>      • Multi-Species export functionality
>> >>              • pick up where Don left off regarding GO data
>> >>              • includes re-factor export wizard
>> >> • TallyEngine queries
>> >> • Data snapshot functionality when linked to different files:
>> >>      • Link to XML source - surface to user the taxon id's contained
>> within
>> >>      • Query and return the species with taxon id which currently
>> reside within a Postgres database
>> >>      • Return species with taxon id contained within a multi-species
>> gdb
>> >> • Finish Yeast database
>> >> RB
>> >>
>> >> On Tue, May 24, 2011 at 4:08 PM, John David N. Dionisio <do...@lm...>
>> wrote:
>> >> Yes, this week is grant-proposal-deadline-week for us, but it does give
>> you some time with checking on your curriculum status and reviewing the code
>> as you last left it.  I also have a meeting at noon on Tuesday, so in a
>> sense that works out; before that meeting, say 10 or 11, will work better
>> for me than after it.
>> >>
>> >> John David N. Dionisio, PhD
>> >> Associate Professor, Computer Science
>> >> Loyola Marymount University
>> >>
>> >>
>> >> On May 24, 2011, at 3:28 PM, Kam Dahlquist wrote:
>> >>
>> >> > Hi,
>> >> >
>> >> > We have a grant due Thursday, so we're pretty focused on working on
>> >> > that right now, so a call probably won't work for us this week.
>> >> >
>> >> > I'm also flexible on call times, I just need to know when.  Next week
>> >> > on Tuesday I have a meeting between 12-2:30, but any other time will
>> work.
>> >> >
>> >> > Cheers,
>> >> > Dr. D
>> >> >
>> >> > At 03:04 PM 5/24/2011, Richard Brous wrote:
>> >> >> Hi Dondi/Dr. D,
>> >> >>
>> >> >> My focus is starting to return to GM Builder after I was able to get
>> >> >> through the pile of stuff I had waiting for me at the start of
>> summer break.
>> >> >>
>> >> >> So here is the current status:
>> >> >>
>> >> >> 1. Emailed Dr. Dorin to discuss options on how this next session
>> >> >> might fit into my curriculum requirements now that I have finished
>> >> >> all my upper division CS electives. Will fill you in once he and I
>> discuss etc.
>> >> >>
>> >> >> 2. Spent some time cleaning out the old commented code and compiling
>> >> >> the software to make sure I haven't broken anything. Commited the
>> >> >> changes up to SourceForge after my testing.
>> >> >>
>> >> >>
>> ----------------------------------------------------------------------------------------------------------------------------------------
>> >> >>
>> >> >> So I know we discussed next steps but before I move forward we
>> >> >> should probably have a con call to ensure sync. Mondays aren't good
>> >> >> for me anymore but Tues - Thurs all work atm.
>> >> >>
>> >> >> Lets figure out which day is most convenient and schedule the weekly
>> >> >> call. What works for you guys?
>> >> >>
>> >> >> Richard
>> >> >>
>> >> >>
>> >> >>
>> >> >
>> >> >
>> >> >
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>> > <ATT00001..txt><ATT00002..txt>
>>
>>
>>
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