Re: [XMLPipeDB-developer] Summer 2011 - ok, breaktimes over =D

[Richard B. <rbr...@gm...>]

I'll suggest Wednesdays at 10am for a weekly call?

A back and forth with Dr. Dorin to discuss where to fit the ongoing work
into my degree requirements is underway at the moment.

Here is the list of enhancements from my end of semester paper:

PRIORITY OF FUTURE FEATURES AND ENHANCEMENTS

   - After a clarifying discussion with Dr. Dahlquist, it seems that based
   on customer need and overall feature direction, that multiple species
   exports should be the highest priority going forward. Based on this fact, I
   submit the below list in priority order for discussion.


   1. Baseline check against balance of species
      - Ms, Mt, Pf(source taxon issue), Pa, and Sa have been successfully
      exported post merge
   2. Some amount of commented code cleanup left in generic species, UniProt
   profile, and overall name2taxon implementation. Also cleanup of non
   commented constructor and methods referencing species name.
   3. Multi-Species export functionality
      - pick up where Don left off regarding GO data
      - includes re-factor export wizard
   4. TallyEngine queries
   5. Data snapshot functionality when linked to different files:
      - Link to XML source - surface to user the taxon id's contained within

      - Query and return the species with taxon id which currently reside
      within a Postgres database
      - Return species with taxon id contained within a multi-species gdb
   6. Finish Yeast database

RB

On Tue, May 24, 2011 at 4:08 PM, John David N. Dionisio <do...@lm...>wrote:

> Yes, this week is grant-proposal-deadline-week for us, but it does give you
> some time with checking on your curriculum status and reviewing the code as
> you last left it.  I also have a meeting at noon on Tuesday, so in a sense
> that works out; before that meeting, say 10 or 11, will work better for me
> than after it.
>
> John David N. Dionisio, PhD
> Associate Professor, Computer Science
> Loyola Marymount University
>
>
> On May 24, 2011, at 3:28 PM, Kam Dahlquist wrote:
>
> > Hi,
> >
> > We have a grant due Thursday, so we're pretty focused on working on
> > that right now, so a call probably won't work for us this week.
> >
> > I'm also flexible on call times, I just need to know when.  Next week
> > on Tuesday I have a meeting between 12-2:30, but any other time will
> work.
> >
> > Cheers,
> > Dr. D
> >
> > At 03:04 PM 5/24/2011, Richard Brous wrote:
> >> Hi Dondi/Dr. D,
> >>
> >> My focus is starting to return to GM Builder after I was able to get
> >> through the pile of stuff I had waiting for me at the start of summer
> break.
> >>
> >> So here is the current status:
> >>
> >> 1. Emailed Dr. Dorin to discuss options on how this next session
> >> might fit into my curriculum requirements now that I have finished
> >> all my upper division CS electives. Will fill you in once he and I
> discuss etc.
> >>
> >> 2. Spent some time cleaning out the old commented code and compiling
> >> the software to make sure I haven't broken anything. Commited the
> >> changes up to SourceForge after my testing.
> >>
> >>
> ----------------------------------------------------------------------------------------------------------------------------------------
> >>
> >> So I know we discussed next steps but before I move forward we
> >> should probably have a con call to ensure sync. Mondays aren't good
> >> for me anymore but Tues - Thurs all work atm.
> >>
> >> Lets figure out which day is most convenient and schedule the weekly
> >> call. What works for you guys?
> >>
> >> Richard
> >>
> >>
> >>
> >
> >
> >
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