Re: [XMLPipeDB-developer] GenMAPP Builder 2.0b43 has been released

[John D. N. D. <do...@lm...>]

Ack, sorry, that's the updated UniProt database library complaining now.  That codebase was built when the UniProt XSD was modified...for that one, I realize now, I was not even thinking about the 1.5/1.6 version distinction.  I guess the students tested that on 1.6 systems, thus explaining why this issue has not been caught until now.

I'll rebuild from bottom up in 1.5 then send another message when it's online. 

John David N. Dionisio, PhD
Assistant Professor, Computer Science
Loyola Marymount University


On Apr 25, 2010, at 7:37 PM, "Dahlquist, Kam D." <kda...@lm...> wrote:

> Hi,
> 
> I just downloaded and tried the new build.  It started this time and I configured the database connection, but when I tried to import UniProt XML, I got the attached error, which looks similiar to before.  I tried with both P. falciparum UniProt xml from Dondi and the yeast from Don.
> 
> Best,
> Kam
> ________________________________________
> From: Don Murphy [djs...@ya...]
> Sent: Sunday, April 25, 2010 3:26 PM
> To: xml...@li...
> Subject: Re: [XMLPipeDB-developer] GenMAPP Builder 2.0b43 has been released
> 
> My apologies on the missing source files. I've been using the following sets of source files:
> 
> https://www.cs.lmu.edu/biodb/fall2009/index.php/File:MRSA252_2009-11-23.zip for S. aureus
> https://www.cs.lmu.edu/biodb/fall2009/index.php/File:Kelia01282010.zip for P. aerugenosa
> https://www.cs.lmu.edu/biodb/fall2009/index.php/File:SCbuildresourcesExport3and4.zip for S. cerevisiae
> 
> Don Murphy