[XMLPipeDB-developer] gmb2b34

[Kam D. <kda...@lm...>]

Hi,

M. tuberculosis finished with extant tables.  It will likely need tweaking 
to its Species Profile for OrderedLocusNames, but I will leave that to the 
students.  I am now going back and re-testing our current species (E. coli 
K12, Arabidopsis, Vibrio, Plasmodium) to make sure that they are still 
functioning.  I will also proceed with finding a few more candidate species 
for the projects so those are ready to go for the class.

There were a few issues leftover from the our released species that I'd 
like to clean up.  I am also paying particular attention to the TallyEngine 
to make sure that is working for all species.  We can talk about that stuff 
when we meet tomorrow.

Best,
Kam

At 10:22 PM 8/17/2009, you wrote:
>Hi Kam,
>
>Awesome, that is very encouraging.  Hope M. tuberculosis goes well too.
>
>John David N. Dionisio, PhD
>Assistant Professor, Computer Science
>Loyola Marymount University
>
>
>On Aug 17, 2009, at 3:30 PM, Kam Dahlquist wrote:
>
> > Hi,
> >
> > The P. aerugenosa export finished with full GO tables and all
> > relationship
> > tables built.  I did a quick visual inspection of the tables in the
> > gdb and
> > they looked OK.
> >
> > I will submit a brief report on the SourceForge wiki, but I don't
> > want to
> > do too much testing because I want the students in the class to do it.
> >
> > I'm going to test an export with Mycobacterium tuberculosis now to
> > see how
> > it performs with a different species.
> >
> > Cheers,
> > Kam