Activity for xia2
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Graeme Winter committed [r5394]
Cope with Windows style drive letters
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Add ability to set the image range on image=/pa...
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Record log files from indexing & refine bravais...
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if trust_beam_centre do not search other index ...
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Richard Gildea committed [r5390]
update test
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Clean HTML clutter
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Revert change which broke xia2html; FIXME need ...
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use dials.check_indexing_symmetry to check for ...
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update test
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use glm background algorithm by default
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update tests
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update tests
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more specific phil parameter
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set min_local=0 in dials.find_spots
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fix tests
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Work in progress towards detecting completely b...
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Markus Gerstel committed [r5378]
dmin -> d_min, patch courtsey of jmp85
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Accept reason in reindex assignment
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#1 explain why setting reindex operation to aid...
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support global_threshold=auto
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pass global_threshold parameter to dials.find_s...
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catch phil interpretation runtimeerror and re-r...
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If unify_setting; do the reindexing to a common...
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Removed previous attempt at reindexing to stand...
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A hill of commits working towards being able to...
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Code to generate masks from diffraction images ...
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typo fix
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Changed syntax of is_similar_to: this is not te...
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If modern aimless; set odd #terms as well as even
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If small molecule don't use 20 bins (messes thi...
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Switch off SdB correction for small molecule wo...
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Use wider scale factor ranges for small molecul...
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Do not want to use this reindex at the moment, ...
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Unwelcome emergent behaviour; now recording mer...
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If small molecule and no reindex op; reindex MT...
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Small changes to manipulate data less if small ...
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Add a pointless tolerance development option; u...
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fix test
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working towards multi-sweep indexing (not yet c...
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support for multiple sweeps in dials.index wrapper
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Bodge scales file to put a space after Nparamet...
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fix test
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read mosaic from integrated_experiments.json ra...
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update test
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increase maximum timeout to 10 minutes. Timeout...
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add missing import
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absolute maximum of 3 * rmsd_p1 to accept index...
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fix broken xia2 -dials
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fast_mode for xia2 -dials: indexing of wedges (...
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bug fix
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Add a kernel size parameter for dials
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fix dials indexer followed by xds integrater
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start counting from 1
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download files in parallel
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Oops dont set defaults
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The big one; move defaults to be using DIALS no...
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probably better to copy downloader code over, s...
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use Downloader() module from bootstrap script. ...
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fix case with download list file present. (It r...
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updated tests
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updated tests
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update tests
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update tests
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a bit of a hack; restrain the sd parameters to ...
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Little command-line tool to make pretty picture...
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Kinder name for failure mode
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Fix get_beam_centre to return the two-theta=0 e...
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If small molecule data allow a larger relative ...
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Allow command-line override of dials integratio...
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add phil parameter for dials.refine interval_wi...
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re-plot blend dendrogram with SWEEP labels; add...
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expand dials phil_file parameters to absolute p...
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dials.spotfinder phil scope -> dials.find_spots
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fix tests
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update cell in test
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use dials.discover_better_experimental_model in...
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bug fix for deprecated -image option
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also take into account min_cc for 'worse' solut...
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Add FIXME for > 1 abs surface@
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Angles were back to front => surface was not co...
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Print the other way around (makes more sense)
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Typo fixed
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Make PNG map of abs corr; not sure if right yet...
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Discussed with PRE over the weekend, this shoul...
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First cut at interpreting Aimless absorption su...
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Changes to cope with centric data => no anomalo...
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Repair broken XML file from pointless (bodge un...
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If multiple data sets share abs surface; should...
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update dials reflection stats
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don't ignore user-specified beam centre in -dia...
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better lattice decision making (and fixes test)
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remove old-style parallelisation
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include min_cc in deciding whether to reject a ...
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Cope with user passing chemical compound (invol...
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bug fix
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A little jiffy to add FLAG column to unmerged d...
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store symops in reciprocal space
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bug fix for XDS CORRECT reindexing, need to tra...
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Use by default abs surface in crystal frame not...
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Little jiffy to read an unmerged MTZ file from ...
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