Hi,
I just post my question to bug carelessly,so I post it again there ,sorry.
when I use CA_best_edge_to_GML.py,an error happen like "
Traceback (most recent call last):
File "CA_best_edge_to_GML.py", line 51, in
id1, lib_id, best5, o1, best3, o3 = l
ValueError: too many values to unpack"
So I chage line 51 to " id1, lib_id, best5, o1, best3, o3 = l[:6]" ,and line 51 work ,but another error happen "
Traceback (most recent call last):
File "CA_best_edge_to_GML.py", line 52, in
G.add_node(id1, unitig="utg%s" % frg_to_tig[id1])
KeyError: '8'
"
so how to solve it ? Or any other way to check if contig is truly circual ?
Thanks!
Si