[wgs-assembler-users] /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.10' not found (required by /share/work/lhuang/my_apps/wgs-8.1/Linux-amd64/bin/gatekeeper)

[<wuk...@16...>]

Dear colleagues,

When I run the command "runCA -p ipagpj029hmc001 -d ipagpj029hmc001_raw useGrid=1 scriptOnGrid=1 doOBT=1 unitigger=bogart /home/kwu/workdir/my_projects/ipag_pj029/data/CA_data/ipagpj029hmc001_1.1.frg /home/kwu/workdir/my_projects/ipag_pj029/data/CA_data/ipagpj029hmc001_2.1.frg" 
After a while, the error massege of ipagpj029hmc001.gkpStore.err is: 
/share/work/lhuang/my_apps/wgs-8.1/Linux-amd64/bin/gatekeeper: /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.10' not found (required by /share/work/lhuang/ 
my_apps/wgs-8.1/Linux-amd64/bin/gatekeeper)

I don't know why it? I know my gcc version is too old. So, I install a new version of gcc on my own account. And I set the environment variable: 
export LD_LIBRARY_PATH=/home/kwu/lib:$LD_LIBRARY_PATH 
export LD_LIBRARY_PATH=/home/kwu/lib64:$LD_LIBRARY_PATH 

But, it seem can't find it.



Best,
 
Kai Wu